DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and YPT7

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_013713.1 Gene:YPT7 / 855012 SGDID:S000004460 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:179 Identity:69/179 - (38%)
Similarity:111/179 - (62%) Gaps:7/179 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKI-KLQIWDTAGQERFR 71
            :.|::::||||||||.::.|:..|.::..:.:|||.||..:.:.:|..|: .:|:|||||||||:
Yeast     8 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQ 72

  Fly    72 TITTAYYRGAMGIMLVYDITQEKSFENIKNW----IRNIEENASADVEKMLLGNKCELTD-KRQV 131
            ::..|:||||...:||||:|...||||||:|    :.:...|:......::||||.:..: |:.|
Yeast    73 SLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIV 137

  Fly   132 SKERGEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRMEA 179
            |::..::||...| |....||||.:|||:.||..:|.....:.:...||
Yeast   138 SEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQADTEA 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 67/170 (39%)
YPT7NP_013713.1 Rab7 9..182 CDD:206655 67/172 (39%)

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