Protein Alignment Rab8 and RABA1b

DIOPT Version :10

• Sequence 1: NP_524172.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_173136.1
• Gene: RABA1b / 838263
• AraportID: AT1G16920
• Length: 216
• Species: Arabidopsis thaliana
• Alignment Length: 187
• Identity: 87/187 - (46%)
• Similarity: 130/187 - (69%)
• Gaps: 6/187 - (3%)

  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||||||::|||||||||:.:|.||:::.||....||||::|..||:::|.|.:|.||||||||||
plant    10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            :|.||:||||||:|.:||||:|:..:|||:..|::.::.:...::..||:|||.:|.....|..|
plant    75 YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTE 139

  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI-KAKTEKRMEAN-----NPPKG 185
            .|:..|.:..:.||||||..:.|||:||..:.:.| :..::|::||.     :.|||
plant   140 DGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKG 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_524172.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	80/166 (48%)
RABA1b	NP_173136.1	Rab11_like	11..175	CDD:206660	79/163 (48%)