DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and GB2

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_195311.1 Gene:GB2 / 829740 AraportID:AT4G35860 Length:211 Species:Arabidopsis thaliana


Alignment Length:166 Identity:84/166 - (50%)
Similarity:124/166 - (74%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
            :||||||.::|||:||||:|:|.:|::..|......|||::|..|.:.:|.:.||||||||||||
plant     2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTAGQE 66

  Fly    69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSK 133
            .||:||.:|||||.|.:||||||:.::|.::.:|:.:..::|:.::..||:||||:|..||.|||
plant    67 SFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDLAHKRAVSK 131

  Fly   134 ERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI 169
            |.|:|.|.|:|:.|:|.||:.:.||||||:..|:.|
plant   132 EEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKI 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 83/164 (51%)
GB2NP_195311.1 PLN03108 1..210 CDD:178655 84/166 (51%)

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