Protein Alignment Rab8 and Rab3b

DIOPT Version :9

• Sequence 1: NP_001246837.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: XP_006238593.1
• Gene: Rab3b / 81755
• RGDID: 620922
• Length: 228
• Species: Rattus norvegicus
• Alignment Length: 187
• Identity: 87/187 - (46%)
• Similarity: 128/187 - (68%)
• Gaps: 9/187 - (4%)

  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:||:||||:||:|.||||..|||:::|.|...|:||:|||||::|:....|::||||||||||
  Rat    17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQ 81

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|||||||||||||.:|:||||.|:||..:::|...|:..:..:.:.:|:||||::.::|.:.
  Rat    82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIP 146

  Fly   133 KERGEQLAIEYGI---------KFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
            .|:|..||.:.|:         .|.|.|||.:|:|.:||..|...|..|....|:.:
  Rat   147 TEKGRLLAEQLGMHTAHTYTWFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTD 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_001246837.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	85/174 (49%)
Rab3b	XP_006238593.1	P-loop_NTPase	22..195	CDD:304359	83/172 (48%)
		RAB	23..192	CDD:197555	82/168 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1426655at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920