DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab8 and rab6a

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001315458.1 Gene:rab6a / 793785 ZFINID:ZDB-GENE-040426-2849 Length:208 Species:Danio rerio


Alignment Length:185 Identity:78/185 - (42%)
Similarity:120/185 - (64%) Gaps:9/185 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTI 73
            |||:.:|:..||||.::.||..|:|:.|:.:||||||..:|:.|:::.::||:||||||||||::
Zfish    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    74 TTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQ 138
            ..:|.|.:...::|||||...||:....||.::.....:||..||:|||.:|.||||||.|.||:
Zfish    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 143

  Fly   139 LAIEYGIKFMETSAKASINVEEAFLTLASDI------KAKTEKRM---EANNPPK 184
            .|.|..:.|:||||||..||::.|..:|:.:      :.|:.:.|   :...||:
Zfish   144 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLEKPPE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/168 (44%)
rab6aNP_001315458.1 Rab6 14..174 CDD:206654 74/159 (47%)

Return to query results.
Submit another query.