DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab26

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_012826040.1 Gene:rab26 / 780350 XenbaseID:XB-GENE-489728 Length:249 Species:Xenopus tropicalis


Alignment Length:181 Identity:97/181 - (53%)
Similarity:132/181 - (72%) Gaps:4/181 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNT-TFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
            ||..||::|:|||||||||:|.||.:.||.. :||||:||||:.:.:.:|..|:|||||||||||
 Frog    53 YDIAFKVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLNVDGVKVKLQIWDTAGQE 117

  Fly    69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSK 133
            |||::|.||||.|..::|:||:|.:.||:||:.|:..|.|.|..||..||||||.:.|.:|.|..
 Frog   118 RFRSVTHAYYRDAHALLLLYDVTNKSSFDNIQAWLTEIHEYAQKDVVIMLLGNKVDSTHERVVKI 182

  Fly   134 ERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPK 184
            |.||:||.|||:.|||||||:.:||:.||:.:|.::|   .:.|:..|.||
 Frog   183 EDGERLAKEYGVPFMETSAKSGLNVDLAFIAIAKELK---HRSMKLPNEPK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 92/166 (55%)
rab26XP_012826040.1 Rab26 57..247 CDD:206695 95/177 (54%)

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