DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB27B

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_004154.2 Gene:RAB27B / 5874 HGNCID:9767 Length:218 Species:Homo sapiens


Alignment Length:199 Identity:86/199 - (43%)
Similarity:134/199 - (67%) Gaps:18/199 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNK----------KIKL 59
            ||||.|||.:||||||||..|:|::::.||..||:|:||||:.:.:..:.:          |:.|
Human     6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70

  Fly    60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENA---SADVEKMLLGN 121
            |:||||||||||::|||::|.|||.:|::|:|.::||.|::||:..::.||   :.|:  :|:||
Human    71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI--VLIGN 133

  Fly   122 KCELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPP--- 183
            |.:|.|:|:|::.:..:||.:|||.:.||||....|||:|..||...|..:.|:.:|....|   
Human   134 KADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDTV 198

  Fly   184 KGGH 187
            .||:
Human   199 NGGN 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 80/178 (45%)
RAB27BNP_004154.2 Rab27A 6..185 CDD:206700 81/180 (45%)
Effector region. /evidence=ECO:0000250 38..46 5/7 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..218 3/9 (33%)

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