DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB13

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_002861.1 Gene:RAB13 / 5872 HGNCID:9762 Length:203 Species:Homo sapiens


Alignment Length:359 Identity:75/359 - (20%)
Similarity:124/359 - (34%) Gaps:108/359 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WPSVL-----FAMAGGVGLSIGNLATQYSLAFVGLSVTEVTAASITVVV---GTTVNYFLDNGLN 75
            |..||     .|:..||..|.|....::..||...:......|||.:.|   |:.:...|...|.
Human    14 WMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPIGSALSTKLG 78

  Fly    76 RADILFSGVGCFMVAVCLGSAVHSSNSADIKAKLGKLSGD--CETVTPEECQRLFGVEEEEEEEK 138
            ...::.:  |..:.|:.:..|..:::...:...:|.|||.  ..|.||                 
Human    79 PRPVVMT--GGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTP----------------- 124

  Fly   139 EMENVKEGSAAFLIALENKRAIKVLGKSMVVGLGITFFAGLSFSLFSPLFN-LATNDQW------ 196
                    :.|.|....::|      :|:.:||.:| ..|:|...|:|||. |..|..|      
Human   125 --------TLACLSRYFSQR------RSLAMGLALT-GVGISSFAFAPLFQWLLNNYAWRGALLL 174

  Fly   197 ------HTLKQG--------------------VPKLIVYTAFFYFSLSCFVIAVALNISFLYKPV 235
                  |.:..|                    :..|:.:..|..::::..:|.....|.:::   
Human   175 VSALSLHLVACGALLRPLSLTEDTAVGGPWAQITSLLCHGPFLRYTVALTLINTGYFIPYVH--- 236

  Fly   236 LDSPRSSFREYLSDWNGRGW-ALAAGLLCGFGNGLQFMGGQAAGYAASDAV-----QALPLVSTF 294
                   ...:|.|   .|| .|.|..|.........:|..|:|: ..|||     :.|.|.:|.
Human   237 -------LVAHLQD---LGWDPLPAAFLLSVAAISDLVGRVASGW-LGDAVPGPVARLLMLWTTL 290

  Fly   295 WGI--YLFGEYRRSSTRTYALLVGMLVMFTVAVG 326
            .|:  .||...:.|:|         ||:..||.|
Human   291 TGVSLALFPVAQASTT---------LVVLAVAYG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 32/162 (20%)
RAB13NP_002861.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 43/191 (23%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 2/13 (15%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 3/16 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 2/29 (7%)

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