DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab8 and RAB4A

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_004569.2 Gene:RAB4A / 5867 HGNCID:9781 Length:218 Species:Homo sapiens


Alignment Length:174 Identity:79/174 - (45%)
Similarity:113/174 - (64%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |::|||:|||.|:||::|.||:|:|.:|.|..|......|||::|..:.|.:..|.:||||||||
Human     6 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 70

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            ||||||::|.:|||||.|.:||||||..:::..:.||:.:....||.::..:|.|||.:|...|:
Human    71 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADRE 135

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTE 174
            |:.....:.|.|..:.|:||||....||||||:..|..|..|.|
Human   136 VTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/165 (45%)
RAB4ANP_004569.2 Rab4 14..174 CDD:206696 71/159 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 44..49 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 70..79 7/8 (88%)

Return to query results.
Submit another query.