DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB3A

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_002857.1 Gene:RAB3A / 5864 HGNCID:9777 Length:220 Species:Homo sapiens


Alignment Length:191 Identity:97/191 - (50%)
Similarity:138/191 - (72%) Gaps:4/191 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:||:||:|:||:|.||||..|||:::|:|...|:||:|||||::||..::|:|||||||||||
Human    17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQ 81

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|||||||||||||.:|:||||.|:||..:::|...|:..:..:.:.:|:||||::.|:|.||
Human    82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVS 146

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNP----PKGGHQL 189
            .|||.|||...|.:|.|.|||.:|||::.|..|...|..|..:.::..:|    .|.|.||
Human   147 SERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 91/165 (55%)
RAB3ANP_002857.1 Rab3 22..186 CDD:206657 89/163 (55%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 4/8 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 14/15 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..220 5/14 (36%)

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