DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and zgc:162171

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001076317.1 Gene:zgc:162171 / 565931 ZFINID:ZDB-GENE-070424-24 Length:224 Species:Danio rerio


Alignment Length:206 Identity:68/206 - (33%)
Similarity:119/206 - (57%) Gaps:8/206 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKK-IKLQIWDTAGQERFR 71
            |.|:|:|||.|||||.|:.|:....|:..:.:|||:||.::.:..|::. ::||:||.|||||:.
Zfish     6 LLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTVVRLQLWDIAGQERYG 70

  Fly    72 TITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAS----ADVEKMLLGNKCELTDKRQVS 132
            .:|..|||.|:|.::|:|:|:..:|:.:..|.::::...:    ..:..:||.|||:.......|
Zfish    71 NMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDLDSKVALGNGRPLPAVLLANKCDQQRYGLCS 135

  Fly   133 K-ERGEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSR 195
            | .:.|..:.::| :.:.|||||.:.|::.|.:.|..:|.|..|:.:...:.| ....|...|..
Zfish   136 KLPKLEHFSRDHGFVGWYETSAKDNTNIDAAIMRLVENIMAVEEENVPVESDP-SVLILPAFDYN 199

  Fly   196 TKDSWLSRCSL 206
            .|:...||||:
Zfish   200 LKERSDSRCSV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 58/170 (34%)
zgc:162171NP_001076317.1 Rab32_Rab38 7..187 CDD:206692 59/179 (33%)

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