DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab44

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_689291.8 Gene:rab44 / 560799 ZFINID:ZDB-GENE-040724-117 Length:5281 Species:Danio rerio


Alignment Length:170 Identity:79/170 - (46%)
Similarity:109/170 - (64%) Gaps:1/170 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTI 73
            |.::::|:|.||||..:.||.|..|...:.||||:|..::|:||.::.:|||||||||||||.:|
Zfish  5097 FNVVMVGNSCVGKTSFIRRFHEGQFTEDYRSTIGVDTFVQTVELPDRTVKLQIWDTAGQERFHSI 5161

  Fly    74 TTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQ 138
            ||..:..|.|::|:|:||..|||.:|::||....|.|..||..||||||.:..: |:|..:.|..
Zfish  5162 TTQVFHKAEGLLLMYEITCSKSFISIRDWISQARERAQDDVVMMLLGNKNDSVN-REVQIQEGAD 5225

  Fly   139 LAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRME 178
            ||.||.|.|||.||....||.|:..|||..:..:..||.|
Zfish  5226 LAREYNIHFMECSAANGANVSESMRTLAELLVQRKRKREE 5265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 76/162 (47%)
rab44XP_689291.8 None

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