DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB4B

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_057238.3 Gene:RAB4B / 53916 HGNCID:9782 Length:213 Species:Homo sapiens


Alignment Length:174 Identity:79/174 - (45%)
Similarity:114/174 - (65%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||:|||:|||.|:||.:|.||:|:|.:|.|:.|......|||::|..|.:.:..|.:||||||||
Human     1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            ||||||::|.:|||||.|.:||||||..:::.::..|:.:....||.::..:|.|||.:|..:|:
Human    66 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPERE 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTE 174
            |:.....:.|.|..:.|:||||....|||||||..|..|..|.:
Human   131 VTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 74/165 (45%)
RAB4BNP_057238.3 Rab4 9..169 CDD:206696 71/159 (45%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 39..44 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 65..74 7/8 (88%)

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