DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab19

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001019497.1 Gene:Rab19 / 500088 RGDID:1565263 Length:217 Species:Rattus norvegicus


Alignment Length:190 Identity:84/190 - (44%)
Similarity:129/190 - (67%) Gaps:5/190 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERF 70
            |||||::|||||.|||||::..|....::.:..:|||:||.:|::|:|.||:|:|:|||||||||
  Rat    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERF 79

  Fly    71 RTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKER 135
            ||||.:|||.|...::.||:|:..:||::.:||..||:..:|::..||:|||.:|.:||.|..|.
  Rat    80 RTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFED 144

  Fly   136 GEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDS 194
            ...||.:|| :..:|||||.|.|::|.|:.:|.::.|:....:...:..:|    .|.||
  Rat   145 ACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLHLYGESAQQG----LPQDS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 79/166 (48%)
Rab19NP_001019497.1 Rab19 15..179 CDD:133267 79/163 (48%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 12/14 (86%)

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