DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and zgc:100918

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001005591.1 Gene:zgc:100918 / 449549 ZFINID:ZDB-GENE-040927-2 Length:205 Species:Danio rerio


Alignment Length:204 Identity:77/204 - (37%)
Similarity:122/204 - (59%) Gaps:10/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||.....|.|::::||||||||.::.::....|:..:.:|||.||..:.:.:|::.:.:||||||
Zfish     1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAS-ADVEK---MLLGNKCELT 126
            |||||:::..|:||||...:||||:|...:|:.:.:|.......|| .|.|.   ::||||.:| 
Zfish    66 GQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL- 129

  Fly   127 DKRQVSKERGEQ-LAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLK 190
            :.|||:.:|.:. ...:..|.:.|||||.:|||::||.|:|.: ..|.|..:|..:.|   .|:|
Zfish   130 ENRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARN-ALKQESEVETYDFP---DQIK 190

  Fly   191 PMDSRTKDS 199
            ..|.|...|
Zfish   191 LRDDRPVSS 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 66/170 (39%)
zgc:100918NP_001005591.1 Rab7 9..179 CDD:206655 67/171 (39%)

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