DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab44

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001351777.1 Gene:Rab44 / 442827 MGIID:3045302 Length:973 Species:Mus musculus


Alignment Length:175 Identity:70/175 - (40%)
Similarity:112/175 - (64%) Gaps:1/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERF 70
            |||:.::.:|||.||||..|.....|||.|...:|:|:||:::.:.:|||...||:||||||||:
Mouse   783 DYLYHVVFLGDSNVGKTSFLHLLHHDAFATGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERY 847

  Fly    71 RTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKER 135
            .::|....|.|.|::|:||:|.::||.:::.|:..:::.....|..:|||||.:..::|||..|.
Mouse   848 HSLTRQLLRKAEGVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKMDCEEERQVPTEA 912

  Fly   136 GEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN 180
            |.:||.|.|:.|.|.||....|:.|..:.||..:|.: |.|::|:
Mouse   913 GRRLAQELGVSFGECSAALGHNILEPMMNLARSLKMQ-EDRLKAS 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 67/165 (41%)
Rab44NP_001351777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..140
Smc <152..>328 CDD:440809
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..481
Atrophin-1 427..>745 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 493..708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 724..779
Rab 788..944 CDD:206640 62/155 (40%)
Blue background indicates that the domain is not in the aligned region.

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