DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RabX1

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster


Alignment Length:162 Identity:62/162 - (38%)
Similarity:96/162 - (59%) Gaps:2/162 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFN--TTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRT 72
            |:|::|..|||||.::.|:.::..:  .:.:.||.:.|....|.||..||||||||||||||:|.
  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGE 137
            :...|||.|...:||:|:||.|:|..||:||:.:..|....:...|:|||.::..:|.||:|...
  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136

  Fly   138 QLAIEYGIKFMETSAKASINVEEAFLTLASDI 169
            ..|...|..:.|||.:....:|:.|::.|..:
  Fly   137 VFATSIGATYFETSTETDQGLEQVFISTAQGL 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 62/162 (38%)
RabX1NP_524713.1 Rab 7..166 CDD:206640 61/158 (39%)

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