DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab30

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_068069614.2 Gene:rab30 / 437023 ZFINID:ZDB-GENE-040718-250 Length:216 Species:Danio rerio


Alignment Length:116 Identity:63/116 - (54%)
Similarity:87/116 - (75%) Gaps:0/116 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||||||::|||::||||||::.||::..|.....:|||:||.|:|:|:...|:||||||||||||
Zfish     4 YDYLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAGQER 68

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLG 120
            ||:||.:|||.|..::|.||||.|.||..:..|:|.||:.|:..|..:|:|
Zfish    69 FRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVG 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 62/115 (54%)
rab30XP_068069614.2 None

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