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Protein Alignment Rab8 and rab3c
DIOPT Version :9
Sequence 1: | NP_001246837.1 |
Gene: | Rab8 / 40168 |
FlyBaseID: | FBgn0262518 |
Length: | 207 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005166882.1 |
Gene: | rab3c / 436803 |
ZFINID: | ZDB-GENE-040718-263 |
Length: | 224 |
Species: | Danio rerio |
Alignment Length: | 184 |
Identity: | 93/184 - (50%) |
Similarity: | 134/184 - (72%) |
Gaps: | 0/184 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
:.:||:||||:||:|.||||..|||:::|.|.:.|:||:|||||::|:..::|:|||||||||||
Zfish 21 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYKNDKRIKLQIWDTAGQ 85
Fly 68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
||:|||||||||||||.:|:||||.|:||..:::|...|:..:..:.:.:|.||||::.::|.||
Zfish 86 ERYRTITTAYYRGAMGFILMYDITNEESFAAVQDWATQIKTYSWDNAQVILAGNKCDMEEERIVS 150
Fly 133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGG 186
.:.|..||.:.|.:|.|||||.:|||::.|..|...|..|....:||:....||
Zfish 151 VDSGRLLAEQLGFEFFETSAKDNINVKQTFDRLVDIICDKMSDTLEADPAAAGG 204
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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