DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RabX4

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster


Alignment Length:177 Identity:100/177 - (56%)
Similarity:136/177 - (76%) Gaps:1/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||..:...:|:|::|||.||||||:.|:.::.:..|:|||||||||.:.|.||...|||||||||
  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELT-DKR 129
            |||||||:|||||||||||:|:||:|..:|:.|:..|:|||:||||.||.|:|.|||||.: .:|
  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVVKVLAGNKCECSATQR 130

  Fly   130 QVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKR 176
            .|.|||||::|..:.:.|.|.|.|::||:|:|||:||..|:.:.|:|
  Fly   131 MVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERR 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 96/166 (58%)
RabX4NP_733043.1 RAB 9..170 CDD:197555 95/160 (59%)

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