DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB19

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001008749.2 Gene:RAB19 / 401409 HGNCID:19982 Length:217 Species:Homo sapiens


Alignment Length:193 Identity:88/193 - (45%)
Similarity:131/193 - (67%) Gaps:5/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:|||||::|||||.|||||::..|....:..|..:|||:||.:|::::|.||:|:|:||||||
Human    12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            |||||||.:|||.|...::.||:|:..:||:|.:||..||:..:|:|..||:||||:|.:||.|.
Human    77 ERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVL 141

  Fly   133 KERGEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDS 194
            .|....||.:|| :..:|||||.|.|:||.|:.:|.::.|:....:...:...|    .|:||
Human   142 FEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGESALNG----LPLDS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 83/166 (50%)
RAB19NP_001008749.2 Rab19 15..179 CDD:133267 83/163 (51%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 4/14 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 12/14 (86%)

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