DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab19

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster


Alignment Length:210 Identity:94/210 - (44%)
Similarity:139/210 - (66%) Gaps:17/210 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            :|:|||::||||.|.|||||:.||....:.....:|||:||.::||.::.|:|||||||||||||
  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            |||||.:|||.|.|:::|||||:..||.|::.||..:....:::|..:|:||||:|.::|:|..|
  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147

  Fly   135 RGEQLA--IEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANN---PPKGGHQL---KP 191
            ...|:.  |...:..||||||.::|||:||..||:::|    ::.:|||   .|:....|   ||
  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELK----RQHDANNVEEVPENTITLGQGKP 208

  Fly   192 MDSRTKDSWLSRCSL 206
            :.|.:     |.|:|
  Fly   209 LKSCS-----SSCNL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 83/167 (50%)
Rab19NP_523970.1 Rab19 19..184 CDD:133267 82/164 (50%)

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