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Protein Alignment Rab8 and Rab40c
DIOPT Version :9
Sequence 1: | NP_001246837.1 |
Gene: | Rab8 / 40168 |
FlyBaseID: | FBgn0262518 |
Length: | 207 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_872616.1 |
Gene: | Rab40c / 359728 |
RGDID: | 727914 |
Length: | 281 |
Species: | Rattus norvegicus |
Alignment Length: | 164 |
Identity: | 75/164 - (45%) |
Similarity: | 104/164 - (63%) |
Gaps: | 1/164 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
|:||||.|.||:|||.|||..||....:.|..:.:..:.|||:|..||.||.:::||::|||:||
Rat 9 KSYDYLLKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQ 73
Fly 68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
.||.||..:|.|||.||:||||||...||:.|..||:.|:|:|.. |.::|:||:..|..||||.
Rat 74 GRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPG-VPRILVGNRLHLAFKRQVP 137
Fly 133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLA 166
.|:....|.:..:.|.|.|...:.||.|:|..|:
Rat 138 TEQARAYAEKNCMTFFEVSPLCNFNVIESFTELS 171
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0078 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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