DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and glo-1

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001024837.1 Gene:glo-1 / 3565633 WormBaseID:WBGene00011083 Length:212 Species:Caenorhabditis elegans


Alignment Length:212 Identity:70/212 - (33%)
Similarity:116/212 - (54%) Gaps:28/212 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELD-NKKIKLQIWDTAGQERFRT 72
            :|:|:|||.|||||.|:.||..:.|::.:.:|||:||.::.:.:| |..:.|||||.:||:|:..
 Worm    12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGV 76

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAS-AD---VEKMLLGNKCELTDKRQVSK 133
            :|..||:.|...::|.|.|:|::.|....|..::::..: ||   |..:||.|||::.:|  :..
 Worm    77 MTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNK--LGD 139

  Fly   134 ERGEQLAIEYG-IKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPM----- 192
            ::...|....| :....||||.|:.:||||..||:.: ..||         :||....|.     
 Worm   140 DKLYDLETNNGFVGSFRTSAKESVGIEEAFKFLANTV-ISTE---------QGGQYDVPFMNREG 194

  Fly   193 -----DSRTKDSWLSRC 204
                 |:.|...:.|:|
 Worm   195 NVNLDDNTTHSRYDSKC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 61/168 (36%)
glo-1NP_001024837.1 Rab32_Rab38 12..212 CDD:206692 70/212 (33%)

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