DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab21

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:175 Identity:66/175 - (37%)
Similarity:105/175 - (60%) Gaps:1/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIEL-DNKKIKLQIWDTAGQERFRT 72
            ||.:|:|:..||||.::.|:.||.||...:||:...|..|.:.| |.::.:|.||||||||||..
  Fly    14 FKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHA 78

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGE 137
            :...||||:.|.:||||||...||:.:|:|:|.:.:....::..:::|||.:|.::|.|:.:...
  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143

  Fly   138 QLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNP 182
            |.|...|.:::|||||.:..|.|.|..|...:..:..:|....:|
  Fly   144 QYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 64/163 (39%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 64/161 (40%)

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