DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab35

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:197 Identity:93/197 - (47%)
Similarity:137/197 - (69%) Gaps:2/197 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||:.:|:|||||:||||||||:.:|.|||:|.|:.::|:|||:||||||::::..::||||||||
  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            |||||||||:.||||..|:::|||:|..:||.|::.|:..|:.|... |:|:|:|||.:..|::.
  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKV 129

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSR 195
            |..|..::.|.:..|:..|||||.:||||..||::...: ...:.|...|...|....|||....
  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQV-LDHKLRTSPNEQQKDTLHLKPNPKG 193

  Fly   196 TK 197
            :|
  Fly   194 SK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 84/165 (51%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 91/195 (47%)

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