DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab9Fb

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:211 Identity:92/211 - (43%)
Similarity:127/211 - (60%) Gaps:20/211 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||||||:|::||.||||:|:|.|||::.|....:.|:|:||::|.:||..:.:.||||||||.||
  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            |:::..:|||||.||:||||||..|||.||..|::.|...:|..|..||:||||:..|.|||..|
  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133

  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPK--GGHQ----LKPMD 193
            :|...|....:.|.|.|||:..||.:.|..|:..|    ..|:..:.|.:  ||.:    .:|.|
  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGI----YNRLVIHTPNRLSGGQETEDTAEPPD 194

  Fly   194 ----------SRTKDS 199
                      .|.|||
  Fly   195 EPINLAGKDRQRAKDS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 81/165 (49%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 76/156 (49%)

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