DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab6b

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_006511799.1 Gene:Rab6b / 270192 MGIID:107283 Length:234 Species:Mus musculus


Alignment Length:182 Identity:75/182 - (41%)
Similarity:116/182 - (63%) Gaps:14/182 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTITTAYYRGAMG 83
            ||||.::.||..|:|:.|:.:||||||..:|:.|:::.::||:||||||||||::..:|.|.:..
Mouse    50 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTV 114

  Fly    84 IMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQLAIEYGIKFM 148
            .::|||||...||:....||.::.....:||..||:|||.:|.||||::.|.|||.|.|..:.|:
Mouse   115 AVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI 179

  Fly   149 ETSAKASINVEEAFLTLAS------DIKAKTEKRM------EANNPP--KGG 186
            |||||...||::.|..:||      :::.|:::.|      :...||  :||
Mouse   180 ETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGG 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 69/158 (44%)
Rab6bXP_006511799.1 Rab6 50..200 CDD:206654 69/149 (46%)

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