Protein Alignment Rab8 and ypt5

DIOPT Version :10

• Sequence 1: NP_524172.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_001342856.1
• Gene: ypt5 / 2542248
• PomBaseID: SPAC6F6.15
• Length: 211
• Species: Schizosaccharomyces pombe
• Alignment Length: 197
• Identity: 76/197 - (38%)
• Similarity: 110/197 - (55%)
• Gaps: 3/197 - (1%)

  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELD-NKKIKLQIWDTAGQERFRTI 73
            ||:|:|||.|||:.::.||.:|.|:....||||..|..:|:.:| |..:||:|||||||||::::
pombe    16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSL 80

  Fly    74 TTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELT-DKRQVSKERGE 137
            ...|||.|...::||||||..|.|..|:||:.::..|...:...|.|||.:|. ::|.|.|...|
pombe    81 APMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAE 145

  Fly   138 QLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSRTKDSWLS 202
            ..|.|..:.|.|||||.:.||.|.|..:|..:..: :|..:|......|..|.......:.|...
pombe   146 AYAAEANLLFFETSAKTAENVNELFTAIAKKLPLE-DKLNQARGAVNRGVNLSEARPAAQPSGSC 209

  Fly   203 RC 204
            .|
pombe   210 SC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_524172.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	70/163 (43%)
ypt5	NP_001342856.1	Rab5_related	16..178	CDD:206653	70/161 (43%)