Protein Alignment Rab8 and ypt3

DIOPT Version :10

• Sequence 1: NP_524172.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_001342809.1
• Gene: ypt3 / 2542219
• PomBaseID: SPAC18G6.03
• Length: 214
• Species: Schizosaccharomyces pombe
• Alignment Length: 207
• Identity: 99/207 - (47%)
• Similarity: 138/207 - (66%)
• Gaps: 7/207 - (3%)

  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69
            ||||||.:|||||||||:.:|.||:.:.||....||||::|..|.|.|||||||.||||||||||
pombe     7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134
            :|.||:||||||:|.::|||||::.||:|:..|::.:.|:|.:::..||:|||.:|...|.||.|
pombe    72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTE 136

  Fly   135 RGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI-KAKTEKRMEANNP---PKGGHQLK---PM 192
            ..:..|.|..:.|:||||..:.||||||.|:.::| :..:.:.:||.:.   |..|..|.   .|
pombe   137 EAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTAGQTLNIAPTM 201

  Fly   193 DSRTKDSWLSRC 204
            :...|....|:|
pombe   202 NDLNKKKSSSQC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_524172.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	89/166 (54%)
ypt3	NP_001342809.1	Rab11_like	8..172	CDD:206660	88/163 (54%)