DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab31

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_659562.2 Gene:Rab31 / 246324 RGDID:628598 Length:195 Species:Rattus norvegicus


Alignment Length:179 Identity:68/179 - (37%)
Similarity:106/179 - (59%) Gaps:12/179 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTIT 74
            |:.|:||:||||:.|:.||.:|.|:.....|||..|..:|:...|:..|..||||||||||.::.
  Rat     8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA 72

  Fly    75 TAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQL 139
            ..||||:...::|||||::.||..:|.|::.::|:...::...:.||||:|:|.|:|..:..::.
  Rat    73 PMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEY 137

  Fly   140 AIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQ 188
            |...|...:|||||.:||:||.|..::..|            ||...|:
  Rat   138 AESIGALVVETSAKNAINIEELFQGISRQI------------PPLDPHE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 65/161 (40%)
Rab31NP_659562.2 Rab5_related 6..168 CDD:206653 65/171 (38%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 30..42 4/11 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 63..79 9/15 (60%)

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