DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

powered by:

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rab8 and Rab8b

DIOPT Version :10

Sequence 1:	NP_524172.1	Gene:	Rab8 / 40168	FlyBaseID:	FBgn0262518	Length:	207	Species:	Drosophila melanogaster
Sequence 2:	NP_775589.1	Gene:	Rab8b / 235442	MGIID:	2442982	Length:	207	Species:	Mus musculus

Alignment Length:	17	Identity:	8/17 - (47%)
Similarity:	10/17 - (58%)	Gaps:	0/17 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly   215 FSLSCFVIAVALNISFL 231
            ||||..:..:.||.|.|
Mouse     2 FSLSLVITFILLNSSLL 18

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_524172.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659
Rab8b	NP_775589.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	4/13 (31%)
		Switch 1. /evidence=ECO:0000250\|UniProtKB:P62820	31..45
		Switch 2. /evidence=ECO:0000250\|UniProtKB:P62820	63..80
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.