DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab3d

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_114080.2 Gene:Rab3d / 19340 MGIID:97844 Length:219 Species:Mus musculus


Alignment Length:203 Identity:97/203 - (47%)
Similarity:139/203 - (68%) Gaps:1/203 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:||:|||||||:|.||||..|||:::|:|...|:||:|||||::|:...:|:|||||||||||
Mouse    17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQ 81

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|||||||||||||.:|:|||..::||..:::|...|:..:..:.:.:|:||||:|.|:|.|.
Mouse    82 ERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVP 146

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSRTK 197
            .|.|.:||.:.|.:|.|.|||.:|||::.|..|...|..|..:.:|.::.| |.:...|....|.
Mouse   147 AEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSP-GSNGKGPALGDTP 210

  Fly   198 DSWLSRCS 205
            ....|.||
Mouse   211 PPQPSSCS 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 88/165 (53%)
Rab3dNP_114080.2 Rab3 22..186 CDD:206657 86/163 (53%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 4/8 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 14/15 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..219 8/30 (27%)

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