DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab17

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_033024.1 Gene:Rab17 / 19329 MGIID:104640 Length:214 Species:Mus musculus


Alignment Length:164 Identity:64/164 - (39%)
Similarity:107/164 - (65%) Gaps:2/164 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFR 71
            |:.||:|:|.|.||||.:..|:.:..|:.. :.|:|..|..:.::|.:..:||:||||||||:::
Mouse    18 YVSKLVLLGSSSVGKTSLALRYMKQDFSNV-LPTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQ 81

  Fly    72 TITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIE-ENASADVEKMLLGNKCELTDKRQVSKER 135
            ::...|:|||...:||||||::.||...:.|:.::| |....:|..||:|||.:|.::|:|:.:.
Mouse    82 SVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQE 146

  Fly   136 GEQLAIEYGIKFMETSAKASINVEEAFLTLASDI 169
            |::.|....:.|||||||.:..|.|.|.|:|.::
Mouse   147 GKEFAESKSLLFMETSAKLNYQVSEIFNTVAQEL 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 64/164 (39%)
Rab17NP_033024.1 Rab5_related 21..181 CDD:206653 63/161 (39%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 43..54 3/11 (27%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 75..91 6/15 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..204
Blue background indicates that the domain is not in the aligned region.

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