Protein Alignment Rab8 and rab-28

DIOPT Version :9

• Sequence 1: NP_001246837.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_501609.1
• Gene: rab-28 / 189429
• WormBaseID: WBGene00004281
• Length: 248
• Species: Caenorhabditis elegans
• Alignment Length: 186
• Identity: 58/186 - (31%)
• Similarity: 100/186 - (53%)
• Gaps: 16/186 - (8%)

  Fly     6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNK-KIKLQIWDTAGQER 69
            |.:.|::::||...|||.|..||::::|:.::..|:|:||..|.|.|.:: ::.:|:||..||..
 Worm    33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSI 97

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASAD---VEKMLLGNKCELTDKRQV 131
            ...:...|..||..:.||||:|..|||||..:|:..:::|..:.   |:.:|:|||.:|.::|.|
 Worm    98 AGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVV 162

  Fly   132 SKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI---------KAKTEKRME 178
            |.|..:..|....:.....|||..   :..|||....:         :|:.|..:|
 Worm   163 SVEAHKNFATSNDMMPTYVSAKTG---DTVFLTFRQAVAEVLNVGLSRAEVEADIE 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_001246837.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	55/178 (31%)
rab-28	NP_501609.1	Rab28	36..248	CDD:206694	57/183 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810