DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and rab-37

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001041294.1 Gene:rab-37 / 180696 WormBaseID:WBGene00004285 Length:223 Species:Caenorhabditis elegans


Alignment Length:198 Identity:93/198 - (46%)
Similarity:129/198 - (65%) Gaps:10/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLLIGDSGVGKTCILFRFSEDAF-NTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRT 72
            ||::|:|||..||||:|.|:.:.|| |..||||:|||::.:.|.:.:||:||||||||||||||:
 Worm    30 FKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRS 94

  Fly    73 ITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGE 137
            :||:|||.|..::|||||....||||.:||:..|:|.....|:..|:||||:|  .|.|..:.|:
 Worm    95 VTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDEGK 157

  Fly   138 QLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMD-SRTKDSWL 201
            :||..|.|.|||||||...||:.|||.||..:     .:::....| ||.....:. :.||...:
 Worm   158 RLAEAYQIPFMETSAKTGFNVDRAFLGLAERM-----LKLKYGFVP-GGEMADTISVADTKKPEI 216

  Fly   202 SRC 204
            :||
 Worm   217 ARC 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 86/163 (53%)
rab-37NP_001041294.1 RAB 30..192 CDD:197555 86/168 (51%)

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