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Protein Alignment Rab8 and rsef-1
DIOPT Version :9
Sequence 1: | NP_001246837.1 |
Gene: | Rab8 / 40168 |
FlyBaseID: | FBgn0262518 |
Length: | 207 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001359915.1 |
Gene: | rsef-1 / 180593 |
WormBaseID: | WBGene00016344 |
Length: | 634 |
Species: | Caenorhabditis elegans |
Alignment Length: | 187 |
Identity: | 67/187 - (35%) |
Similarity: | 111/187 - (59%) |
Gaps: | 9/187 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTI 73
|::::.||:.|||:..:.|.....|.....||:|:||.::|:.:|.:.:.||:||||||||||::
Worm 440 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSL 504
Fly 74 TTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCE--LTDKRQVSKERG 136
..:|:|.|.|.:||||:..|:||..:::||..|:|:....:..:|:|||.: ::....|:|..|
Worm 505 CKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKTDG 569
Fly 137 EQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN----NP---PKGG 186
..:|...|:.||||||....|::.|.|.|..::.|..:..:.:. || .|||
Worm 570 ASMAAAMGVLFMETSALDGSNIDNAMLALTRELMAVEDVEIRSTGVVLNPAVAKKGG 626
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0078 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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