Protein Alignment Rab8 and Rab3c

DIOPT Version :9

• Sequence 1: NP_001246837.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_598220.1
• Gene: Rab3c / 171058
• RGDID: 620923
• Length: 227
• Species: Rattus norvegicus
• Alignment Length: 197
• Identity: 96/197 - (48%)
• Similarity: 140/197 - (71%)
• Gaps: 4/197 - (2%)

  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:||:||||:||:|.||||..|||:::|:|.:.|:||:|||||::|:..:.|:|||||||||||
  Rat    25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQ 89

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|||||||||||||.:|:||||.|:||..:::|...|:..:..:.:.:|:||||::.|:|.||
  Rat    90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVVS 154

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSRTK 197
            .|||..|..:.|.:|.|||||.:|||::.|..|...|..|..:.:|.:....|..|    .:|.|
  Rat   155 TERGRHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITGAKQ----STRLK 215

  Fly   198 DS 199
            ::
  Rat   216 ET 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_001246837.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	90/165 (55%)
Rab3c	NP_598220.1	Rab3	30..194	CDD:206657	88/163 (54%)
		RAB	31..191	CDD:197555	87/159 (55%)
		Effector region. /evidence=ECO:0000250	59..67		5/7 (71%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	202..227		4/20 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910