DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab3

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_061508108.1 Gene:Rab3 / 1274970 VectorBaseID:AGAMI1_012080 Length:244 Species:Anopheles gambiae


Alignment Length:188 Identity:92/188 - (48%)
Similarity:142/188 - (75%) Gaps:5/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
            :.:||:||||:||:|.||||..|||:::|:|.:.|:||:|||||::|:...:|::||||||||||
Mosquito    39 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQ 103

  Fly    68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVS 132
            ||:|||||||||||||.:|:||||.|:||.::::|:..|:..:..:.:.:|:||||::.|:|.:|
Mosquito   104 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDERVIS 168

  Fly   133 KERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEAN-----NPPKG 185
            .|||:|||.:.|::|.|||||.:::|.:.|..|...|..|..:.::::     ..|||
Mosquito   169 FERGKQLADQLGVEFFETSAKENVHVTDVFERLVDIICDKMSESLDSDPTLVAGGPKG 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 88/165 (53%)
Rab3XP_061508108.1 None

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