DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab4

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_313105.2 Gene:Rab4 / 1274041 VectorBaseID:AGAMI1_000885 Length:224 Species:Anopheles gambiae


Alignment Length:174 Identity:83/174 - (47%)
Similarity:113/174 - (64%) Gaps:0/174 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |:::||||||.|:||.:|.||:|:|..|.|:.|......|||::|..|.:.:..|.|||||||||
Mosquito     1 MSESYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            ||||||::|.:|||||.|.:||||.|...||..:.||:.:....||.::..:|:|||.:|.:.|:
Mosquito    66 GQERFRSVTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLASQNICILLVGNKKDLEEDRE 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTE 174
            |:.......|.|..:.|:|||||...|||||||..:..|.||.|
Mosquito   131 VTFLEASNFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 78/165 (47%)
Rab4XP_313105.2 Rab4 9..169 CDD:206696 74/159 (47%)

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