DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab1

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_061497112.1 Gene:Rab1 / 1273973 VectorBaseID:AGAMI1_003967 Length:201 Species:Anopheles gambiae


Alignment Length:183 Identity:108/183 - (59%)
Similarity:141/183 - (77%) Gaps:0/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |:..|||||||||||||||||:|:|.||::|.:..::|||||:|||||||:||.|.|||||||||
Mosquito     1 MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            |||||||||::|||||.||::|||.|...||||:|.|:..||..|..:|.|:|:||||:|..|::
Mosquito    66 GQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKCDLQTKKR 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPP 183
            |......:||.:.||.|:|||||.:.|||:||:|:|::||.:......|.:||
Mosquito   131 VDTTTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAADPP 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 103/165 (62%)
Rab1XP_061497112.1 None

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