DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab35

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_311848.5 Gene:Rab35 / 1272924 VectorBaseID:AGAMI1_007430 Length:202 Species:Anopheles gambiae


Alignment Length:199 Identity:99/199 - (49%)
Similarity:141/199 - (70%) Gaps:10/199 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||:.||:|||||:||||||||:.:|.|||::.|:.::|:|||:||||||:.::.:::||||||||
Mosquito     1 MAREYDHLFKLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            |||||||||..||||..|:::|||:|..:||.|:|.|::.||.|... |.|:|:|||.:...::.
Mosquito    66 GQERFRTITNTYYRGTHGVIVVYDVTNGESFGNVKRWLQEIESNCDI-VNKVLVGNKNDDPTRKV 129

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI---KAKTEKRM--EANNP----PKGG 186
            |:.|..|:.|.:..||..|||||.::||||.||.:...:   |.:|:|:.  |.||.    .||.
Mosquito   130 VTTEDAERFANQMEIKLFETSAKDNLNVEEMFLAITEQVLRHKKQTQKQQQSETNNDTVQLKKGT 194

  Fly   187 HQLK 190
            |:.|
Mosquito   195 HKKK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 87/168 (52%)
Rab35XP_311848.5 P-loop containing Nucleoside Triphosphate Hydrolases 3..171 CDD:476819 87/168 (52%)

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