DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab8 and Rab23

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_061512129.1 Gene:Rab23 / 1271192 VectorBaseID:AGAMI1_000298 Length:223 Species:Anopheles gambiae


Alignment Length:173 Identity:65/173 - (37%)
Similarity:101/173 - (58%) Gaps:1/173 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTIT 74
            |::::|:.|||||.::.|:.:..:...:..|||:||..|.||:|.:.|::.:|||||||.|..||
Mosquito    11 KVIVVGNGGVGKTSMVQRYCKGIYTKDYKKTIGVDFLERQIEIDGEDIRIMLWDTAGQEEFDAIT 75

  Fly    75 TAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQL 139
            .||||||...:|.:..|...|||.|:.|.|.: ||..:::..:|:.||.:|.|:..||.|..|.|
Mosquito    76 KAYYRGAQACVLTFSTTDRASFEAIREWKRKV-ENECSEIPTVLVQNKIDLMDQAVVSFEEAEAL 139

  Fly   140 AIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNP 182
            |...|.:.:.||.|..:||...|..||:......:::...:.|
Mosquito   140 AYSLGCRLIRTSVKEDVNVATVFRYLATKCHQMMKQQYSQSAP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 64/161 (40%)
Rab23XP_061512129.1 None

Return to query results.
Submit another query.