DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RabX4

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_308884.2 Gene:RabX4 / 1270205 VectorBaseID:AGAMI1_005765 Length:219 Species:Anopheles gambiae


Alignment Length:179 Identity:102/179 - (56%)
Similarity:134/179 - (74%) Gaps:1/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||..:...:|:|::|||.||||||:.|:.::.:..|:|||||||||.:.|.||...|||||||||
Mosquito     1 MALDFAATYKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELT-DKR 129
            |||||||:|||||||||||:|:||:|..:||.|:..|:|||:|||:.||.|:|.|||||.. .:|
Mosquito    66 GQERFRTLTTAYYRGAMGILLMYDVTSLESFNNLSYWLRNIQENAAPDVVKVLAGNKCECNPPQR 130

  Fly   130 QVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRME 178
            .|.|||||::|..:.:.|.|.|.|.:||:|:||||||..|:.:.|.|.|
Mosquito   131 AVDKERGEKIAENFDMPFFEVSCKQNINIEDAFLTLARKIREQREHRGE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 97/166 (58%)
RabX4XP_308884.2 RAB 9..170 CDD:197555 96/160 (60%)

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