DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab8a

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_446450.2 Gene:Rab8a / 117103 RGDID:621144 Length:207 Species:Rattus norvegicus


Alignment Length:207 Identity:165/207 - (79%)
Similarity:185/207 - (89%) Gaps:0/207 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |||||||||||||||||||||||:||||||||||:||||||||||||||||||.|:|||||||||
  Rat     1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            ||||||||||||||||||||||||||.||||:||:||||||||:||||||||:|||||::.||||
  Rat    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQ 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDSR 195
            |||||||:||::||||||||||||:||||.||.|||.|||||.:|::|.|:|....|.:|....:
  Rat   131 VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQ 195

  Fly   196 TKDSWLSRCSLL 207
            .|.:...|||||
  Rat   196 QKRTSFFRCSLL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 146/165 (88%)
Rab8aNP_446450.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 146/165 (88%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 12/13 (92%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 16/16 (100%)

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