Protein Alignment Rab8 and Rab28

DIOPT Version :9

• Sequence 1: NP_001246837.1
• Gene: Rab8 / 40168
• FlyBaseID: FBgn0262518
• Length: 207
• Species: Drosophila melanogaster
• Sequence 2: NP_446430.1
• Gene: Rab28 / 117049
• RGDID: 620891
• Length: 221
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 64/214 - (29%)
• Similarity: 104/214 - (48%)
• Gaps: 10/214 - (4%)

  Fly     3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIEL-DNKKIKLQIWDTAG 66
            ::.|...|::::||...|||.:...|:::.|...:..|||:||.:|.|.| .|..:.||:||..|
  Rat     7 ESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGG 71

  Fly    67 QERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNW---IRNIEENASADVEKMLLGNKCELTDK 128
            |.....:...|..||.||:||||||..:||||:::|   ::.:.|.:.......|:|||.:|...
  Rat    72 QTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHM 136

  Fly   129 RQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDI------KAKTEKRMEANNPPKGGH 187
            |.|..::..:...|.|......|||...:|...|..:|::|      ||:.|:...........:
  Rat   137 RTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIKLNKAEIEQSQRVVKADIVNY 201

  Fly   188 QLKPMDSRTKDSWLSRCSL 206
            ..:||.........|.|::
  Rat   202 NQEPMSRTVNPPRSSMCAV 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab8	NP_001246837.1	Rab8_Rab10_Rab13_like	6..172	CDD:206659	58/175 (33%)
Rab28	NP_446430.1	Rab28	13..221	CDD:206694	63/208 (30%)
		Effector region. /evidence=ECO:0000250	41..49		3/7 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810