DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and RAB35

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_006852.1 Gene:RAB35 / 11021 HGNCID:9774 Length:201 Species:Homo sapiens


Alignment Length:185 Identity:91/185 - (49%)
Similarity:134/185 - (72%) Gaps:8/185 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            ||:.||:|||||:||||||||:.:|.||:::.|:.::|:|||:||||||:|::.:|:||||||||
Human     1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            |||||||||:.||||..|:::|||:|..:||.|:|.|:..|.:|.. ||.::|:|||.:..:::.
Human    66 GQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKV 129

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAF-------LTLASDIKAKTEKRME 178
            |..|...:.|.:.||:..|||||.::||||.|       |....|..||.:::.:
Human   130 VETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQ 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 86/172 (50%)
RAB35NP_006852.1 Rab35 3..201 CDD:133310 89/183 (49%)
Switch 1. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 30..42 3/11 (27%)
Switch 2. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 64..80 13/15 (87%)

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