DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and Rab15

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_598811.3 Gene:Rab15 / 104886 MGIID:1916865 Length:212 Species:Mus musculus


Alignment Length:200 Identity:102/200 - (51%)
Similarity:146/200 - (73%) Gaps:16/200 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |||.||.||:|||||||||||||:|.||:::.|:::.|||||:|||::|||:|..|:::||||||
Mouse     1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            ||||::|||..|||.|.||.|||||:.|:|:::|..|:.:::|.|...|:|:|:|||.:...|||
Mouse    66 GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQ 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKPMDS- 194
            |.:|:|:|||.|||:.|.||||..::|::|:|..|       ||..::|:.        |.:|. 
Mouse   131 VGREQGQQLAKEYGMDFYETSACTNLNIKESFTRL-------TELVLQAHR--------KELDGL 180

  Fly   195 RTKDS 199
            ||:.|
Mouse   181 RTRAS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 90/165 (55%)
Rab15NP_598811.3 Rab15 9..172 CDD:206698 90/169 (53%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 12/16 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..212
Blue background indicates that the domain is not in the aligned region.

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