DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and XB5873314

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:XP_004916872.1 Gene:XB5873314 / 100496061 XenbaseID:XB-GENE-5873315 Length:210 Species:Xenopus tropicalis


Alignment Length:212 Identity:71/212 - (33%)
Similarity:116/212 - (54%) Gaps:19/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELD-NKKIKLQIWDTAGQER 69
            :.|.|:|::||.|||||.|:.|:..:.|:..:.:|||:||.::.:..| |..::||:||.|||||
 Frog     8 EILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLNTMVRLQLWDIAGQER 72

  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASAD----VEKMLLGNKCELTDKRQ 130
            |..:|..|||.|:|.::|.|:.:..:.|::..|..:::......    :..:||||||:     |
 Frog    73 FGHMTRLYYREAVGALVVCDLGRVATVESVSRWKEDLDSKVCLQNGNPIPVILLGNKCD-----Q 132

  Fly   131 V----SKERGEQLAIEYGIKFME-TSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLK 190
            |    |....|||..|.|..... ||||.::|:|.|..:|..::.|..|.....|:|    :.::
 Frog   133 VPLGTSASNLEQLGEELGFSHSHMTSAKENVNIEMAISSLIKEMIANDEDYEPRNDP----NIIQ 193

  Fly   191 PMDSRTKDSWLSRCSLL 207
            |....:.:...|:||.|
 Frog   194 PSLHPSVNKACSQCSRL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 62/175 (35%)
XB5873314XP_004916872.1 Rab32_Rab38 12..207 CDD:206692 67/203 (33%)

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