DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab8 and zgc:171927

DIOPT Version :10

Sequence 1:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001096112.1 Gene:zgc:171927 / 100124616 ZFINID:ZDB-GENE-070822-21 Length:210 Species:Danio rerio


Alignment Length:181 Identity:99/181 - (54%)
Similarity:137/181 - (75%) Gaps:4/181 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTA 65
            |...|||||||||||||||||:|:|.||::|.:..::|||||:||||||||::.|.:||||||||
Zfish     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDTA 65

  Fly    66 GQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQ 130
            |||||||||::|||||.||::|||:|:::||.|:|.|:..|:..|..:|.|:|:|||.:|:.|:.
Zfish    66 GQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSDLSSKKV 130

  Fly   131 VSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANN 181
            |......:......|..:|||||.:.|||:|||.:||:|    :||:.|::
Zfish   131 VDFTTAMEFTESLKIPLLETSAKNANNVEKAFLAMASEI----QKRIGADS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 94/165 (57%)
zgc:171927NP_001096112.1 Rab1_Ypt1 7..172 CDD:206661 93/168 (55%)

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